{"id":97,"date":"2022-11-10T14:14:16","date_gmt":"2022-11-10T13:14:16","guid":{"rendered":"https:\/\/www.ephyswiki.org\/?post_type=yada_wiki&#038;p=97"},"modified":"2022-11-10T14:15:09","modified_gmt":"2022-11-10T13:15:09","slug":"universal-probe-finder","status":"publish","type":"yada_wiki","link":"https:\/\/www.ephyswiki.org\/?yada_wiki=universal-probe-finder","title":{"rendered":"Universal Probe Finder"},"content":{"rendered":"<p>Whenever you perform electrophysiological recordings, you want to know which area you recorded from. While some great tools exist, the <a href=\"https:\/\/github.com\/JorritMontijn\/UniversalProbeFinder\">Universal Probe Finder<\/a> allows you to fine-tune the probe location using electrophysiological responses. You can align your histological slices in 3D (Figure 1), and find the anatomical boundaries of brain regions along your probe (Figure 2).<\/p>\n<figure id=\"attachment_98\" aria-describedby=\"caption-attachment-98\" style=\"width: 1375px\" class=\"wp-caption alignright\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full wp-image-98\" src=\"https:\/\/www.ephyswiki.org\/wp-content\/uploads\/SliceFinder.jpg\" alt=\"SliceFinder view\" width=\"1385\" height=\"694\" \/><figcaption id=\"caption-attachment-98\" class=\"wp-caption-text\">Figure 1. Example view of the Universal Probe Finder, showing the SliceFinder program.<\/figcaption><\/figure>\n<figure id=\"attachment_99\" aria-describedby=\"caption-attachment-99\" style=\"width: 1377px\" class=\"wp-caption alignright\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full wp-image-99\" src=\"https:\/\/www.ephyswiki.org\/wp-content\/uploads\/ProbeFinder.jpg\" alt=\"Example ProbeFinder view\" width=\"1387\" height=\"770\" \/><figcaption id=\"caption-attachment-99\" class=\"wp-caption-text\">Figure 2. The ProbeFinder program makes it easier to find area boundaries based on electrophysiological responses to your stimuli. In this example, you can see sharp edges in responsiveness using the ZETA-test for the boundaries of visual cortex.<\/figcaption><\/figure>\n<p>&nbsp;<\/p>\n","protected":false},"author":2,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"open","template":"","meta":{"_bbp_topic_count":0,"_bbp_reply_count":0,"_bbp_total_topic_count":0,"_bbp_total_reply_count":0,"_bbp_voice_count":0,"_bbp_anonymous_reply_count":0,"_bbp_topic_count_hidden":0,"_bbp_reply_count_hidden":0,"_bbp_forum_subforum_count":0,"footnotes":""},"wiki_cats":[11,13],"wiki_tags":[19,15,14],"class_list":["post-97","yada_wiki","type-yada_wiki","status-publish","hentry","wiki_cats-analysis","wiki_cats-experiments","wiki_tags-data-analysis","wiki_tags-experiments","wiki_tags-spikeglx"],"_links":{"self":[{"href":"https:\/\/www.ephyswiki.org\/index.php?rest_route=\/wp\/v2\/yada_wiki\/97","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ephyswiki.org\/index.php?rest_route=\/wp\/v2\/yada_wiki"}],"about":[{"href":"https:\/\/www.ephyswiki.org\/index.php?rest_route=\/wp\/v2\/types\/yada_wiki"}],"author":[{"embeddable":true,"href":"https:\/\/www.ephyswiki.org\/index.php?rest_route=\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ephyswiki.org\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=97"}],"version-history":[{"count":2,"href":"https:\/\/www.ephyswiki.org\/index.php?rest_route=\/wp\/v2\/yada_wiki\/97\/revisions"}],"predecessor-version":[{"id":101,"href":"https:\/\/www.ephyswiki.org\/index.php?rest_route=\/wp\/v2\/yada_wiki\/97\/revisions\/101"}],"wp:attachment":[{"href":"https:\/\/www.ephyswiki.org\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=97"}],"wp:term":[{"taxonomy":"wiki_cats","embeddable":true,"href":"https:\/\/www.ephyswiki.org\/index.php?rest_route=%2Fwp%2Fv2%2Fwiki_cats&post=97"},{"taxonomy":"wiki_tags","embeddable":true,"href":"https:\/\/www.ephyswiki.org\/index.php?rest_route=%2Fwp%2Fv2%2Fwiki_tags&post=97"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}